261635 (pcna) PLN00057
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
261635 chr_3 (pcna) PLN00057 133281 134163 + PLN00057
NCBI ID Ensembl Genomes exon ID
7452799 Thaps261635.1, Thaps261635.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0086
Normalized Mean Residue
Thaps_bicluster_0241
0.29
(bd439) POLBc_alpha
0.9536
(cdc2) PKc_like superfamily
0.936
(bd1983) RecA-like_NTPases superfamily
0.9281
AE_Prim_S
0.9228
(bd1081) NA
0.9185
NADB_Rossmann superfamily
0.9157
ABC_ATPase superfamily
0.9156
DNA_pol_E_B
0.9143
hypothetical protein
0.911
(PMM1) PLN02423
0.907
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PCNA superfamily Proliferating Cell Nuclear Antigen (PCNA) domain found in eukaryotes and archaea. These polymerase... - 281.825 7.52E-95 4 - 256 superfamily 238322
PCNA superfamily Proliferating Cell Nuclear Antigen (PCNA) domain found in eukaryotes and archaea. These polymerase... - 281.825 7.52E-95 4 - 256 superfamily 238322
PLN00057 proliferating cell nuclear antigen; Provisional - 462.963 6.88E-166 1 - 261 multi-dom 177688
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_29196 PHATRDRAFT_29196 203554 240926 456826 Cre12.g515850.t1.2 AT1G07370.1 350409
KEGG description KEGG Pathway
Mismatch repair map03430
GO:0003677 GO:0005634 GO:0005660 GO:0006275 GO:0030337 GO:0003887 GO:0003889 GO:0003890 GO:0003891 GO:0003893 GO:0003894 GO:0003895 GO:0015999 GO:0016000 GO:0016448 GO:0016449 GO:0016450 GO:0016451 GO:0016452 GO:0019984 -

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

NA

Details: 
NA
GO Category: 
NA

regulation of DNA replication

Details: 
Any process that modulates the frequency, rate or extent of DNA replication.
GO Category: 
BP

DNA polymerase processivity factor activity

Details: 
An enzyme regulator activity that increases the processivity of polymerization by DNA polymerase, by allowing the polymerase to move rapidly along DNA while remaining topologically bound to it.
GO Category: 
MF

DNA-directed DNA polymerase activity

Details: 
Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA
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