261719 AdoMet_MTases superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261719	chr_3	AdoMet_MTases superfamily	550695	551461	-	AdoMet_MTases superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7441792	Thaps261719.3, Thaps261719.1, Thaps261719.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0295

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0119	0.42	8.5 8.5

Most Highly Correlated Transcripts

4108 hypothetical protein 0.9543	264065 (cobA) PLN02625 0.8919	268443 SAICAR_synt_Sc 0.8858	2890 hypothetical protein 0.8774	8446 hypothetical protein 0.8708	2018 HA 0.8703
25138 Methyltransf_32 0.8615	4940 MiaA superfamily 0.8597	260786 PTZ00345 0.8592	6953 PRK11713 0.8587

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AdoMet_MTases superfamily		S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases...	-	93.5433	3.34E-23	51 - 223	superfamily	266528

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_9546	PHATRDRAFT_9546	153797	167598	Not available	Not available	Not available	307708

KEGG

KEGG description	KEGG Pathway
Metabolic pathways	map01100

GO Terms

GO:0016206 -

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