261867 (rfC_2) PRK12402
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
261867 chr_3 (rfC_2) PRK12402 1502007 1503267 - PRK12402
NCBI ID Ensembl Genomes exon ID
7449502 Thaps261867.2, Thaps261867.1, Thaps261867.3
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0184
SNC1
0.8668
hypothetical protein
0.8423
hypothetical protein
0.8329
hypothetical protein
0.831
Dpy-30 superfamily
0.8304
hypothetical protein
0.8167
(bd894) Peptidase_M14_like superfamily
0.8111
CK_II_beta
0.8111
TPR_12
0.8093
ASF1_hist_chap
0.8089
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rep_fac_C superfamily Replication factor C C-terminal domain; This is the C-terminal domain of RFC (replication factor-C... - 98.3475 1.43E-25 257 - 346 superfamily 254867
Rep_fac_C superfamily Replication factor C C-terminal domain; This is the C-terminal domain of RFC (replication factor-C... - 98.3475 1.43E-25 257 - 346 superfamily 254867
PRK12402 replication factor C small subunit 2; Reviewed - 174.792 4.36E-51 1 - 346 multi-dom 237090
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50732 PHATRDRAFT_50732 201090 258837 445045 Cre16.g679950.t1.2 AT5G27740.1 340838
KEGG description KEGG Pathway
Mismatch repair map03430
GO:0003677 GO:0005663 GO:0006260 GO:0003887 GO:0003889 GO:0003890 GO:0003891 GO:0003893 GO:0003894 GO:0003895 GO:0015999 GO:0016000 GO:0016448 GO:0016449 GO:0016450 GO:0016451 GO:0016452 GO:0019984 -

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

DNA replication factor C complex

Details: 
A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase.
GO Category: 
CC

DNA replication

Details: 
The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.
GO Category: 
BP

DNA-directed DNA polymerase activity

Details: 
Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer.
GO Category: 
MF

NA

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NA
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NA

NA

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NA
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NA

NA

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NA
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NA

NA

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NA
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NA

NA

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NA
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NA

NA

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NA
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NA

NA

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NA
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NA

NA

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NA
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NA

NA

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NA
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NA

NA

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NA
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NA

NA

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NA
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NA

NA

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NA
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NA

NA

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NA
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NA

NA

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NA
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NA
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