262046 (MGT1) MgtE
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262046 chr_4 (MGT1) MgtE 288694 289662 - MgtE

Synonyms

NCBI ID Ensembl Genomes exon ID
7446756 Thaps262046.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0051

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0139
 0.40

Most Highly Correlated Transcripts

270222

0.9509

9943

hypothetical protein
0.9044

37539

cpn10
0.8906

4524

DHQS
0.8893

17859

DER1 superfamily
0.8832

38707

Aldolase_Class_I superfamily
0.8809

4604

hypothetical protein
0.8781

25708

hypothetical protein
0.8755

36007

Aldolase_II superfamily
0.8753

268062

PRK14293
0.8742

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MgtE superfamily Divalent cation transporter; This region is the integral membrane part of the eubacterial MgtE... - 73.9025 2.10E-16 185 - 311 superfamily 242091
MgtE Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism] - 143.183 7.76E-39 143 - 318 multi-dom 225148

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42545 PHATRDRAFT_42545 224245 295016 114097 Cre06.g288050.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006812 GO:0008324 -

GO:0006812

cation transport

Details: 
The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0008324

cation transmembrane transporter activity

Details: 
Catalysis of the transfer of cation from one side of the membrane to the other.
GO Category: 
MF

Add comment

Log in to post comments