262047 Ube1
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
262047 chr_4 Ube1 290263 294296 + Ube1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0298
Normalized Mean Residue
Thaps_bicluster_0157
0.39
hypothetical protein
0.9356
hypothetical protein
0.8693
(ALATS2) PLN02900
0.8692
(VTS1) PTZ00419
0.8684
hypothetical protein
0.8483
eukaryotic translation initiation factor 3, subunit 10
0.8363
(DAD1) PRK00911
0.8347
(bd1221) recQ_fam
0.8336
(ITS1) PLN02882
0.8336
SpoU_methylase superfamily
0.829
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
E1_enzyme_family superfamily Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes... - 111.976 1.01E-26 168 - 547 superfamily 266547
E1_enzyme_family superfamily Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes... - 111.976 1.01E-26 168 - 547 superfamily 266547
Ube1 ubiquitin-activating enzyme E1; This model represents the full length, over a thousand amino acids... - 622.294 0 164 - 1127 multi-dom 130475
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 297610 Not available Not available Not available Not available
KEGG description KEGG Pathway
Ubiquitin mediated proteolysis map04120
GO:0004839 GO:0006464 GO:0006512 GO:0003824 GO:0004842 -

ubiquitin activating enzyme activity

Details: 
Catalysis of the reaction: a protein L-lysine + a ubiquitin + ATP = a protein-N-ubiquityl-lysine + AMP + diphosphate. This reaction is the activation of the C-terminal carboxyl group of ubiquitin by the formation of a high-energy thiolester bond in an ATP-dependent manner.
GO Category: 
MF

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF
Log in to post comments