262433 Pumilio superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
262433 chr_5 Pumilio superfamily 456138 458279 - Pumilio superfamily
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0417
Normalized Mean Residue
Thaps_bicluster_0189
0.32
(bd1934) NA
0.9393
PRK06116
0.9112
(bd1806) AAT_I superfamily
0.9094
(bd643) NA
0.8997
(bd415) arom_aa_hydroxylase superfamily
0.8939
(Tp_HSF_1.3e) HSF_DNA-bind superfamily
0.8852
(bd690) NA
0.8805
(PDHA1) TPP_E1_PDC_ADC_BCADC
0.8718
hypothetical protein
0.8578
hypothetical protein
0.8578
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Pumilio superfamily Pumilio-family RNA binding domain; Puf repeats (also labelled PUM-HD or Pumilio homology domain)... - 238.645 7.30E-73 264 - 535 superfamily 153420
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003723 GO:0016071 -

RNA binding

Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO Category: 
MF

mRNA metabolic process

Details: 
The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.
GO Category: 
BP
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