262795 PIN_SF superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
262795 chr_6 PIN_SF superfamily 613771 616034 + PIN_SF superfamily
NCBI ID Ensembl Genomes exon ID
7448588 Thaps262795.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0133
hypothetical protein
0.8786
hypothetical protein
0.8688
hypothetical protein
0.8611
prc
0.8579
PldB
0.8553
hypothetical protein
0.8528
hypothetical protein
0.8504
hypothetical protein
0.8494
hypothetical protein
0.8449
EMP70 superfamily
0.8444
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PIN_SF superfamily PIN (PilT N terminus) domain: Superfamily; PIN_SF The PIN (PilT N terminus) domain belongs to a... - 119.014 1 - 188 superfamily 265458
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46971 PHATRDRAFT_46971 136790 169767 Not available Cre16.g670550.t1.1 AT1G01880.1 Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003677 GO:0004518 GO:0006281 GO:0008852 -

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

nuclease activity

Details: 
Catalysis of the hydrolysis of ester linkages within nucleic acids.
GO Category: 
MF

DNA repair

Details: 
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
GO Category: 
BP

exodeoxyribonuclease I activity

Details: 
Catalysis of the degradation of single-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides.
GO Category: 
MF
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