264451 MPN_RPN11_CSN5
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264451 chr_17 MPN_RPN11_CSN5 365052 366427 - MPN_RPN11_CSN5

Synonyms

NCBI ID Ensembl Genomes exon ID
7444221 Thaps264451.3, Thaps264451.2, Thaps264451.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0212

Most Highly Correlated Transcripts

11286

hypothetical protein
0.8609

25944

p450 superfamily
0.85

261400

NA
0.8407

27377

Peptidase_S9
0.8261

2233

(atpC_1) V_ATP_synt_C
0.826

269412

SNAP
0.8257

4318

TIM21 superfamily
0.8235

25077

hypothetical protein
0.8226

22963

WD40 superfamily
0.8209

25736

hypothetical protein
0.8197

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MPN_RPN11_CSN5 Mov34/MPN/PAD-1 family: proteasomal regulatory protein Rpn11 and signalosome complex subunit CSN5;... cl13996 286.842 5.56E-95 58 - 348 specific 163700
MPN superfamily Mpr1p, Pad1p N-terminal (MPN) domains; MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+) domains... - 286.842 5.56E-95 58 - 348 superfamily 265414

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43086 PHATRDRAFT_43086 159871 264689 75732 Cre09.g399178.t1.1 AT1G71230.1 358493

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008233 GO:0008234 -

GO:0008233

peptidase activity

Details: 
Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
GO Category: 
MF

GO:0008234

cysteine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

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