264776 (CLPB2) chaperone_ClpB
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264776 chr_22 (CLPB2) chaperone_ClpB 245149 248598 - chaperone_ClpB

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0107

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0283
 0.35

Most Highly Correlated Transcripts

268453

PRK11183
0.8706

37934

GRX_PICOT_like
0.866

25681

hypothetical protein
0.8559

41655

Chloroa_b-bind
0.8527

31751

PKCI_related
0.847

263132

Phytochelatin superfamily
0.8464

22846

hypothetical protein
0.8459

1125

N2227 superfamily
0.8456

10055

hypothetical protein
0.8438

2874

FKBP_C
0.8432

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 80.6531 2.52E-17 669 - 826 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 80.6531 2.52E-17 669 - 826 superfamily 267297
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 80.6531 2.52E-17 669 - 826 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 80.6531 2.52E-17 669 - 826 superfamily 267297
ClpB_D2-small C-terminal, D2-small domain, of ClpB protein; This is the C-terminal domain of ClpB protein,... cl11083 104.4 2.82E-26 865 - 945 specific 255983
ClpB_D2-small superfamily C-terminal, D2-small domain, of ClpB protein; This is the C-terminal domain of ClpB protein,... - 104.4 2.82E-26 865 - 945 superfamily 264218
chaperone_ClpB ATP-dependent chaperone ClpB; Members of this protein family are the bacterial ATP-dependent... - 1252.16 0 76 - 952 multi-dom 234173

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_26173 PHATRDRAFT_26173 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0000166 GO:0017111 GO:0005515 GO:0019538 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0019538

protein metabolic process

Details: 
The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.
GO Category: 
BP

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