2647 lysozyme_like superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
2647 chr_2 lysozyme_like superfamily 1497010 1498173 + lysozyme_like superfamily
NCBI ID Ensembl Genomes exon ID
7443061 Thaps2647.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0485
Normalized Mean Residue
Thaps_bicluster_0031
0.36
GH18_chitinase-like superfamily
0.9003
(bd1891) COG3899
0.8535
hypothetical protein
0.8422
(bd1487) PLN02688
0.8387
hypothetical protein
0.8366
hypothetical protein
0.8362
7tm_3 superfamily
0.8275
hypothetical protein
0.8206
hypothetical protein
0.8125
hypothetical protein
0.8121
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
lysozyme_like superfamily lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT... - 109.307 7.02E-28 102 - 353 superfamily 260275
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available 477026
KEGG description KEGG Pathway
Not available Not available
GO:0004568 GO:0006032 GO:0009613 GO:0016998 GO:0008843 -

chitinase activity

Details: 
Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO Category: 
MF

chitin catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA

cell wall macromolecule catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.
GO Category: 
BP

endochitinase activity

Details: 
Catalysis of the hydrolysis of nonterminal (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins. Typically, endochitinases cleave randomly within the chitin chain.
GO Category: 
MF
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