26702 ATPase-Plipid
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
26702 chr_1 ATPase-Plipid 1637673 1643230 + ATPase-Plipid

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0163

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0177
 0.33

Most Highly Correlated Transcripts

21469

hypothetical protein
0.9153

23514

hypothetical protein
0.9062

13448

Sec1
0.8979

12836

EEP superfamily
0.8978

23051

hypothetical protein
0.8953

27813

Hid1 superfamily
0.8952

36372

S_TKc
0.8947

20838

hypothetical protein
0.8893

8535

hypothetical protein
0.8888

20753

PDI_a_family
0.8871

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ATPase-Plipid phospholipid-translocating P-type ATPase, flippase; This model describes the P-type ATPase... - 841.654 0 6 - 1130 multi-dom 233509

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_52368 PHATRDRAFT_52368 203822 242785 452148 Cre16.g656500.t1.1 AT1G59820.1 478276

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0006812 GO:0015662 GO:0016020 GO:0016021 GO:0016887 GO:0004012 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006812

cation transport

Details: 
The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0015662

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate.
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

GO:0016887

ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO Category: 
MF

GO:0004012

phospholipid-translocating ATPase activity

Details: 
Catalysis of the movement of phospholipids from one membrane bilayer leaflet to the other, driven by the hydrolysis of ATP.
GO Category: 
MF

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