268350 SpoU_methylase
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
268350 chr_2 SpoU_methylase 1964308 1965704 - SpoU_methylase
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0229
Normalized Mean Residue
Thaps_bicluster_0270
0.28
Nop52 superfamily
0.9071
hypothetical protein
0.9048
hypothetical protein
0.9045
(RT4) RpsD
0.9007
WD40 superfamily
0.8993
RRM_ABT1_like
0.8992
RBFA
0.8985
Cyt_C5_DNA_methylase superfamily
0.898
hypothetical protein
0.8972
hypothetical protein
0.8956
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SpoU_methylase SpoU rRNA Methylase family; This family of proteins probably use S-AdoMet. cl17307 106.825 6.95E-28 184 - 352 specific 249983
SpoU_methylase superfamily SpoU rRNA Methylase family; This family of proteins probably use S-AdoMet. - 106.825 6.95E-28 184 - 352 superfamily 266618
rRNA_methyl_3 rRNA methylase, putative, group 3; this is part of the trmH (spoU) family of rRNA methylases [... - 76.2279 2.23E-16 134 - 357 multi-dom 129290
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 238567 56158 469008 Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003723 GO:0006396 GO:0008173 -

RNA binding

Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO Category: 
MF

RNA processing

Details: 
Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
GO Category: 
BP

RNA methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule.
GO Category: 
MF
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