268714 TypA_BipA
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
268714 chr_4 TypA_BipA 1422588 1424866 + TypA_BipA
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0229
Normalized Mean Residue
Thaps_bicluster_0162
0.37
PLN02286
0.9245
PLN03233
0.9244
PLN03127
0.9189
acolac_lg
0.9161
PLN02347
0.9081
PRK05192
0.9074
DHDPS
0.9072
tsf
0.9061
hypothetical protein
0.9032
(GGPS5) Trans_IPPS_HT
0.896
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
BipA_TypA_C BipA_TypA_C: a C-terminal portion of BipA or TypA having homology to the C terminal domains of the... cl02785 103.739 1.12E-26 377 - 451 specific 239681
Elongation_Factor_C superfamily Elongation factor G C-terminus. This domain includes the carboxyl terminal regions of elongation... - 103.739 1.12E-26 377 - 451 superfamily 261447
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 201.283 1.29E-60 1 - 169 superfamily 266525
Translation_Factor_II_like superfamily Translation_Factor_II_like: Elongation factor Tu (EF-Tu) domain II-like proteins. Elongation factor... - 82.9164 3.69E-19 176 - 266 superfamily 261449
TypA_BipA GTP-binding protein TypA/BipA; This bacterial (and Arabidopsis) protein, termed TypA or BipA, a GTP... - 615.08 0 1 - 579 multi-dom 233394
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_40621 PHATRDRAFT_40621 205590 319997 Not available Cre13.g606000.t1.2 AT2G31060.2 536873
KEGG description KEGG Pathway
Not available Not available
GO:0005525 GO:0006412 GO:0003924 GO:0008547 -

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP

GTPase activity

Details: 
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA
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