269412 SNAP
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
269412 chr_9 SNAP 229630 230667 + SNAP
NCBI ID Ensembl Genomes exon ID
7449279 Thaps269412.2, Thaps269412.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0098
p450 superfamily
0.8468
P4Hc
0.8297
MPN_RPN11_CSN5
0.8257
WD40 superfamily
0.8094
MPC superfamily
0.8084
hypothetical protein
0.8079
hypothetical protein
0.8058
sensory_box
0.8033
hypothetical protein
0.8008
TRAPP
0.797
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SNAP Soluble NSF attachment protein, SNAP; The soluble NSF attachment protein (SNAP) proteins are... - 341.451 5.01E-117 10 - 290 multi-dom 259075
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48103 PHATRDRAFT_48103 168254 234886 258834 Cre02.g099150.t1.2 AT3G56190.1 258189
KEGG description KEGG Pathway
Not available Not available
GO:0005478 GO:0005783 GO:0005794 GO:0006886 -

NA

Details: 
NA
GO Category: 
NA

endoplasmic reticulum

Details: 
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
GO Category: 
CC

Golgi apparatus

Details: 
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
GO Category: 
CC

intracellular protein transport

Details: 
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO Category: 
BP
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