269776 Ribosomal_L1
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
269776 chr_14 Ribosomal_L1 677913 679597 + Ribosomal_L1
NCBI ID Ensembl Genomes exon ID
7451341 Thaps269776.2, Thaps269776.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0220
Normalized Mean Residue
Thaps_bicluster_0276
0.21
SrmB
0.9557
DEADc
0.9522
Nop53
0.948
DUS_like_FMN
0.9444
COG1084
0.9388
Ribosomal_P0_like
0.9376
(bd1667) Mpp10
0.9353
Bystin
0.9332
Ebp2 superfamily
0.9306
PIN_SF superfamily
0.9266
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L1 Ribosomal protein L1. The L1 protein, located near the E-site of the ribosome, forms part of the... cl00322 107.655 4.97E-27 23 - 261 specific 238235
Ribosomal_L1 superfamily Ribosomal protein L1. The L1 protein, located near the E-site of the ribosome, forms part of the... - 107.655 4.97E-27 23 - 261 superfamily 260353
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_26035 PHATRDRAFT_26035 180263 221358 110237 Cre07.g314100.t1.2 AT2G42650.1 473722
KEGG description KEGG Pathway
Not available Not available
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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