269871 PIN_EXO1
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
269871 chr_16a PIN_EXO1 342106 345428 + PIN_EXO1
NCBI ID Ensembl Genomes exon ID
7442533 Thaps269871.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0358
hypothetical protein
0.974
hypothetical protein
0.8219
(bd917) NA
0.7811
0.7647
hypothetical protein
0.7253
PDEase_I
0.6972
(bd1879) NA
0.685
hypothetical protein
0.6789
hypothetical protein
0.6781
hypothetical protein
0.6249
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PIN_EXO1 PIN domain of Exonuclease-1, a structure-specific, divalent-metal-ion dependent, 5'... cl14812 288.626 5.01E-91 1 - 213 specific 189027
PIN_SF superfamily PIN (PilT N terminus) domain: Superfamily; PIN_SF The PIN (PilT N terminus) domain belongs to a... - 288.626 5.01E-91 1 - 213 superfamily 265458
H3TH_EXO1 H3TH domain of Exonuclease-1, a structure-specific, divalent-metal-ion dependent, 5'... cl14815 124.225 2.26E-33 227 - 297 specific 188628
H3TH_StructSpec-5'-nucleases superfamily H3TH domains of structure-specific 5' nucleases (or flap endonuclease-1-like) involved in... - 124.225 2.26E-33 227 - 297 superfamily 265460
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 61649 Cre07.g353950.t1.1 AT1G29630.2 540882
KEGG description KEGG Pathway
Mismatch repair map03430
GO:0003677 GO:0004518 GO:0006281 GO:0003923 GO:0016787 GO:0051336 -

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

nuclease activity

Details: 
Catalysis of the hydrolysis of ester linkages within nucleic acids.
GO Category: 
MF

DNA repair

Details: 
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
GO Category: 
BP

GPI-anchor transamidase activity

Details: 
Catalysis of the formation of the linkage between a protein and a glycosylphosphatidylinositol anchor. The reaction probably occurs by subjecting a peptide bond to nucleophilic attack by the amino group of ethanolamine-GPI, transferring the protein from a signal peptide to the GPI anchor.
GO Category: 
MF

hydrolase activity

Details: 
Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO Category: 
MF

regulation of hydrolase activity

Details: 
Any process that modulates the frequency, rate or extent of hydrolase activity, the catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO Category: 
BP
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