269966 (VTS1) PTZ00419
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
269966 chr_18 (VTS1) PTZ00419 697808 701727 + PTZ00419
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0231
Normalized Mean Residue
Thaps_bicluster_0190
0.26
(RPA1) RNAP_I_RPA1_N
0.9262
hypothetical protein
0.9221
reductase
0.9199
eukaryotic translation initiation factor 3, subunit 10
0.9174
(bd1828) NA
0.9107
COG2319
0.9081
Nop52 superfamily
0.9062
(DNA_TopoIV) PRK05560
0.9039
DUF1253
0.9033
Urb2 superfamily
0.9025
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ValRS_core catalytic core domain of valyl-tRNA synthetases; Valine amino-acyl tRNA synthetase (ValRS)... cl00015 569.187 0 38 - 648 specific 185677
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 569.187 0 38 - 648 superfamily 260139
Anticodon_Ia_Val Anticodon-binding domain of valyl tRNA synthetases; This domain is found in valyl tRNA synthetases... cl12020 181.216 1.28E-52 648 - 791 specific 153416
Anticodon_Ia_like superfamily Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains; This domain is... - 181.216 1.28E-52 648 - 791 superfamily 264512
tRNA-synt_1_2 superfamily Leucyl-tRNA synthetase, Domain 2; This is a family of the conserved region of Leucine-tRNA ligase... - 69.8159 1.73E-13 228 - 329 superfamily 257918
PTZ00419 valyl-tRNA synthetase-like protein; Provisional - 1481.79 0 1 - 982 multi-dom 240411
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available 314768
KEGG description KEGG Pathway
Aminoacyl-tRNA biosynthesis map00970
GO:0004812 GO:0005524 GO:0006418 GO:0003779 GO:0004832 GO:0006438 -

aminoacyl-tRNA ligase activity

Details: 
Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO Category: 
MF

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

tRNA aminoacylation for protein translation

Details: 
The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
GO Category: 
BP

actin binding

Details: 
Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
GO Category: 
MF

valine-tRNA ligase activity

Details: 
Catalysis of the reaction: L-valine + ATP + tRNA(Val) = L-valyl-tRNA(Val) + AMP + diphosphate + 2 H(+).
GO Category: 
MF

valyl-tRNA aminoacylation

Details: 
The process of coupling valine to valyl-tRNA, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO Category: 
BP
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