270127 (CHT1_2) Glyco_18
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
270127 chr_23 (CHT1_2) Glyco_18 249520 250755 + Glyco_18
NCBI ID Ensembl Genomes exon ID
7442655 Thaps270127.1, Thaps270127.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0152
Normalized Mean Residue
Thaps_bicluster_0041
0.50
(CHT1_1) GH18_chitinase-like superfamily
0.8144
hypothetical protein
0.7526
COG3899
0.7325
2A0106
0.7301
hypothetical protein
0.7263
(bd1124) LSm4
0.7216
hypothetical protein
0.7205
hypothetical protein
0.7198
hypothetical protein
0.7148
hypothetical protein
0.7138
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GH18_chitinase-like superfamily The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer... - 111.882 3.64E-28 3 - 159 superfamily 263970
Glyco_18 Glyco_18 domain; Glyco_18 domain. - 124.328 1.41E-32 3 - 159 multi-dom 214753
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0005576 GO:0006030 GO:0008061 -

extracellular region

Details: 
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
GO Category: 
CC

chitin metabolic process

Details: 
The chemical reactions and pathways involving chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO Category: 
BP

chitin binding

Details: 
Interacting selectively and non-covalently with chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO Category: 
MF
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