29228 (GcpE) PRK02048
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
29228 chr_8 (GcpE) PRK02048 998619 1001698 - PRK02048
NCBI ID Ensembl Genomes exon ID
7452877 Thaps29228.2, Thaps29228.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0039
Normalized Mean Residue
Thaps_bicluster_0038
0.59
(bd812) NA
0.9029
(rpl34) ribosomal protein L34
0.8737
(rpl34) ribosomal protein L34
0.8534
0.8436
hypothetical protein
0.8291
hypothetical protein
0.8103
SGL
0.8085
(SQDB1) PLN02572
0.8066
(rps11) ribosomal protein S11
0.8039
(bd811) NA
0.7952
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GcpE superfamily GcpE protein; In a variety of organisms, including plants and several eubacteria, isoprenoids are... - 169.999 4.34E-47 515 - 669 superfamily 267853
GcpE superfamily GcpE protein; In a variety of organisms, including plants and several eubacteria, isoprenoids are... - 169.999 4.34E-47 515 - 669 superfamily 267853
PRK02048 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional - 524.012 4.73E-178 7 - 671 multi-dom 179361
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44955 PHATRDRAFT_44955 259614 287456 442353 Cre12.g490350.t1.1 AT5G60600.3 Not available
KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110
GO:0016114 GO:0046429 -

terpenoid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.
GO Category: 
BP

4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity

Details: 
Catalysis of the reaction: (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate + H2O + 2 oxidized ferredoxin = 2-C-methyl-D-erythritol 2,4-cyclodiphosphate + 2 reduced ferredoxin.
GO Category: 
MF
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