30691 AdoMet_MTases
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
30691 chr_22 AdoMet_MTases 587129 588340 + AdoMet_MTases

Synonyms

NCBI ID Ensembl Genomes exon ID
7442861 Thaps30691.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0270
 0.28

Most Highly Correlated Transcripts

264345

SpoU
0.936

38472

HA2
0.9134

21491

hypothetical protein
0.9099

27083

eIF3_N superfamily
0.9077

22276

Gar1
0.9073

7151

hypothetical protein
0.9069

23356

Gst
0.9066

261109

NBD_sugar-kinase_HSP70_actin superfamily
0.9055

28570

(L7Ae) Ribosomal_L7Ae superfamily
0.9053

36007

Aldolase_II superfamily
0.9045

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases... cl17173 59.3658 1.70E-11 94 - 204 specific 100107
AdoMet_MTases superfamily S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases... - 59.3658 1.70E-11 94 - 204 superfamily 266528

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_55177 PHATRDRAFT_55177 278171 238955 461445 Cre12.g558450.t1.2 AT1G23820.1 477587

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0008757 GO:0003824 GO:0004766 -

GO:0008757

S-adenosylmethionine-dependent methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate.
GO Category: 
MF

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0004766

spermidine synthase activity

Details: 
Catalysis of the reaction: S-adenosylmethioninamine + putrescine = 5'-methylthioadenosine + spermidine.
GO Category: 
MF

Add comment

Log in to post comments