32758 Ntn_hydrolase superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
32758 chr_3 Ntn_hydrolase superfamily 1265108 1266124 + Ntn_hydrolase superfamily
NCBI ID Ensembl Genomes exon ID
7451711 Thaps32758.3, Thaps32758.2, Thaps32758.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0328
Normalized Mean Residue
Thaps_bicluster_0217
0.33
Chloroa_b-bind
0.8567
TIM_phosphate_binding superfamily
0.8563
(bd923) NA
0.856
hypothetical protein
0.8527
PLN02350
0.8525
Sec1
0.8511
FeThRed_B
0.848
GRX_PICOT_like
0.8418
(bd1806) AAT_I superfamily
0.8339
RPN7 superfamily
0.8267
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ntn_hydrolase superfamily The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are... - 165.476 3.20E-50 29 - 226 superfamily 260443
PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover,... - 103.532 2.13E-26 28 - 223 multi-dom 223711
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
33252 Not available 162196 202208 Not available Not available Not available Not available
KEGG description KEGG Pathway
Proteasome map03050
GO:0004175 GO:0005839 GO:0006511 GO:0004298 GO:0004299 -

endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain.
GO Category: 
MF

proteasome core complex

Details: 
A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.
GO Category: 
CC

ubiquitin-dependent protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO Category: 
BP

threonine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA
Log in to post comments