33241 (RL17) Ribosomal_L22
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
33241 chr_3 (RL17) Ribosomal_L22 1152773 1153477 + Ribosomal_L22
NCBI ID Ensembl Genomes exon ID
7441879 Thaps33241.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0047
Normalized Mean Residue
Thaps_bicluster_0227
0.33
(RS19) Ribosomal_S19e
0.9094
(RS16) PLN00210
0.8906
(RS4) PLN00036
0.8845
(RL18a) RPL20A
0.8803
(RL15) PTZ00026
0.8798
(RL11A) PTZ00156
0.8781
(RS24) PTZ00071
0.8769
(RL28) Ribosomal_L28e
0.8768
(RL24) Ribosomal_L24e_L24 superfamily
0.8767
WD40
0.8756
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L22 Ribosomal protein L22/L17e. L22 (L17 in eukaryotes) is a core protein of the large ribosomal... cl00327 101.413 3.34E-27 57 - 193 specific 238205
Ribosomal_L22 superfamily Ribosomal protein L22/L17e. L22 (L17 in eukaryotes) is a core protein of the large ribosomal... - 101.413 3.34E-27 57 - 193 superfamily 260357
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_29177 PHATRDRAFT_29177 270500 309680 Not available Cre13.g568900.t1.2 AT1G67430.1 284211
KEGG description KEGG Pathway
Ribosome map03010
GO:0003735 GO:0005622 GO:0005840 GO:0006412 GO:0015934 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP

large ribosomal subunit

Details: 
The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
GO Category: 
CC
Log in to post comments