33685 (MCM1) PRK09426
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
33685 chr_4 (MCM1) PRK09426 1562151 1564451 - PRK09426
NCBI ID Ensembl Genomes exon ID
7443705 Thaps33685.1, Thaps33685.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0006
Normalized Mean Residue
Thaps_bicluster_0261
0.35
PLN02539
0.9293
hypothetical protein
0.8994
hypothetical protein
0.8957
PTZ00430
0.8936
hypothetical protein
0.8914
hypothetical protein
0.8912
hypothetical protein
0.8895
hypothetical protein
0.8894
PDI_a_family
0.8879
hypothetical protein
0.8875
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MM_CoA_mutase_alpha_like Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, Alpha subunit-like... cl00817 945.252 0 26 - 556 specific 239651
MM_CoA_mutase superfamily Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM)-like family; contains proteins... - 945.252 0 26 - 556 superfamily 242116
MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which... cl00293 180.096 3.14E-53 605 - 723 specific 239022
B12-binding_like superfamily B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (... - 180.096 3.14E-53 605 - 723 superfamily 260332
PRK09426 methylmalonyl-CoA mutase; Reviewed - 1221.65 0 26 - 733 multi-dom 236508
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_51830 PHATRDRAFT_51830 279011 261420 445439 Not available Not available 542262
KEGG description KEGG Pathway
Metabolic pathways map01100
GO:0004494 GO:0008152 GO:0050897 GO:0016853 -

methylmalonyl-CoA mutase activity

Details: 
Catalysis of the reaction: (R)-methylmalonyl-CoA = succinyl-CoA.
GO Category: 
MF

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

cobalt ion binding

Details: 
Interacting selectively and non-covalently with a cobalt (Co) ion.
GO Category: 
MF

isomerase activity

Details: 
Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
GO Category: 
MF
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