33696 zf-CHY
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
33696 chr_4 zf-CHY 2078669 2080567 - zf-CHY
NCBI ID Ensembl Genomes exon ID
7451372 Thaps33696.2, Thaps33696.1, Thaps33696.3
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0466
AAA
0.9071
(bd1765) NA
0.9068
(bd218) Chloroa_b-bind superfamily
0.9027
(bd1160) Chloroa_b-bind superfamily
0.8992
EEP superfamily
0.8907
(bd1820) Fasciclin
0.8883
(bd1387) psbE
0.8864
(bd1949) NA
0.8756
hypothetical protein
0.8746
(bd1304) Ycf4
0.8675
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
zf-CHY CHY zinc finger; This family of domains are likely to bind to zinc ions. They contain many... cl19861 74.2783 2.27E-16 177 - 253 specific 253220
zf-CHY superfamily CHY zinc finger; This family of domains are likely to bind to zinc ions. They contain many... - 74.2783 2.27E-16 177 - 253 superfamily 268214
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14699 PHATRDRAFT_14699 Not available Not available Not available Not available AT5G25560.1 Not available
KEGG description KEGG Pathway
Ubiquitin mediated proteolysis map04120
GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP
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