337 TEF1
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
337 chr_3 TEF1 1417816 1419765 + TEF1
NCBI ID Ensembl Genomes exon ID
7441940 Thaps337.3, Thaps337.1, Thaps337.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0285
Aldolase_II superfamily
0.9224
SAICAR_synt_Sc
0.9178
WD40
0.9135
WD40
0.9122
hypothetical protein
0.9121
0.9121
(GGTB1) PLN03201
0.9118
RabGAP-TBC
0.9115
hypothetical protein
0.9113
hypothetical protein
0.9112
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EF1_alpha Elongation Factor 1-alpha (EF1-alpha) protein family; EF1 is responsible for the GTP-dependent... cl17170 331.763 3.50E-110 160 - 384 specific 206670
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 331.763 3.50E-110 160 - 384 superfamily 266525
Translation_factor_III superfamily Domain III of Elongation factor (EF) Tu (EF-TU) and EF-G. Elongation factors (EF) EF-Tu and EF-G... - 103.071 4.10E-26 482 - 587 superfamily 261448
Translation_Factor_II_like superfamily Translation_Factor_II_like: Elongation factor Tu (EF-Tu) domain II-like proteins. Elongation factor... - 68.3208 4.51E-14 392 - 473 superfamily 261449
TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] - 397.824 8.87E-133 158 - 588 multi-dom 227581
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15121 PHATRDRAFT_15121 274533 214754 Not available Cre13.g565750.t1.2 AT5G10630.1 318941
KEGG description KEGG Pathway
mRNA surveillance pathway map03015
GO:0005525 GO:0006412 GO:0003924 GO:0008547 -

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP

GTPase activity

Details: 
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA
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