34293 (Tp_CCCH3) RRM_SF superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34293 chr_5 (Tp_CCCH3) RRM_SF superfamily 174691 175947 - RRM_SF superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447262 Thaps34293.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0429

Most Highly Correlated Transcripts

35728

FtsZ_type1
0.8725

24068

SNARE component
0.8495

15398

FtsZ_type1
0.8396

10025

WD40 superfamily
0.8201

38780

DSPc superfamily
0.817

264663

TRX_family
0.8014

37549

Ribosomal_S18
0.7998

33126

Rab8_Rab10_Rab13_like
0.7951

37430

Sm_D2
0.794

35136

NA
0.7879

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 70.3664 2.91E-15 242 - 317 superfamily 266524

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10122 PHATRDRAFT_10122 160233 158646 462082 Cre02.g075650.t1.2 AT1G07360.1 Not available

KEGG

KEGG description KEGG Pathway
Spliceosome map03040

GO Terms

GO:0003676 -

GO:0003676

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

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