35523 ICL_PEPM
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
35523 chr_7 ICL_PEPM 493147 495141 + ICL_PEPM
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0026
Normalized Mean Residue
Thaps_bicluster_0054
0.44
VDE superfamily
0.8962
(bd718) PRK10387
0.8604
(bd392) DEXDc
0.8562
(bd1161) NA
0.8467
(bd841) Abhydrolase_6
0.8456
(bd1091) NA
0.8371
GRX_GRXh_1_2_like
0.8366
(bd1449) SpoT
0.8364
hypothetical protein
0.8338
hypothetical protein
0.8269
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ICL_PEPM Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage. Known... cl00435 172.288 2.19E-49 93 - 507 specific 119340
ICL_KPHMT superfamily Members of the ICL/PEPM_KPHMT enzyme superfamily catalyze the formation and cleavage of either P-C... - 172.288 2.19E-49 93 - 507 superfamily 260420
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14401 PHATRDRAFT_14401 Not available 44315 436528 Cre06.g282800.t1.2 AT3G21720.1 312079
KEGG description KEGG Pathway
Metabolic pathways map01100
GO:0003824 GO:0008152 GO:0005198 GO:0005874 GO:0007018 GO:0004451 GO:0006097 -

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

structural molecule activity

Details: 
The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell.
GO Category: 
MF

microtubule

Details: 
Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
GO Category: 
CC

microtubule-based movement

Details: 
A microtubule-based process that is mediated by motor proteins and results in the movement of organelles, other microtubules, or other particles along microtubules.
GO Category: 
BP

isocitrate lyase activity

Details: 
Catalysis of the reaction: isocitrate = glyoxylate + succinate.
GO Category: 
MF

glyoxylate cycle

Details: 
A modification of the TCA cycle occurring in some plants and microorganisms, in which isocitrate is cleaved to glyoxylate and succinate. Glyoxylate can then react with acetyl-CoA to form malate.
GO Category: 
BP
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