35907 Prp18
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
35907 chr_8 Prp18 965111 966335 - Prp18
NCBI ID Ensembl Genomes exon ID
7449861 Thaps35907.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0427
Normalized Mean Residue
Thaps_bicluster_0107
0.36
cysE
0.9245
0.923
Aldolase_II superfamily
0.9038
SynMuv_product superfamily
0.8986
GRX_PICOT_like
0.8982
hypothetical protein
0.8981
hypothetical protein
0.8974
0.8958
fabG
0.8943
WD40
0.8904
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Prp18 superfamily Prp18 domain; The splicing factor Prp18 is required for the second step of pre-mRNA splicing. The... - 206.698 4.30E-65 254 - 395 superfamily 251567
Prp18 superfamily Prp18 domain; The splicing factor Prp18 is required for the second step of pre-mRNA splicing. The... - 206.698 4.30E-65 254 - 395 superfamily 251567
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12898 PHATRDRAFT_12898 163673 156609 438550 Cre13.g567750.t1.2 AT1G54590.1 489594
KEGG description KEGG Pathway
Spliceosome map03040
GO:0005681 GO:0008380 -

spliceosomal complex

Details: 
Any of a series of ribonucleoprotein complexes that contain RNA and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the splicing of a messenger RNA primary transcript to excise an intron.
GO Category: 
CC

RNA splicing

Details: 
The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.
GO Category: 
BP
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