3629 UCH
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
3629 chr_3 UCH 1402103 1403996 + UCH
NCBI ID Ensembl Genomes exon ID
7451279 Thaps3629.2, Thaps3629.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0384
Normalized Mean Residue
Thaps_bicluster_0285
0.31
(bd886) NA
0.9238
(bd1670) SUL1
0.9109
hypothetical protein
0.9016
hypothetical protein
0.8957
hypothetical protein
0.8826
hypothetical protein
0.8715
hypothetical protein
0.8707
(bd1852) NA
0.8678
MDR8
0.8663
(bd765) NA
0.8656
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C19 Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove... cl02553 171.897 5.68E-49 241 - 592 specific 239072
Peptidase_C19 superfamily Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove... - 171.897 5.68E-49 241 - 592 superfamily 261337
UCH Ubiquitin carboxyl-terminal hydrolase; Ubiquitin carboxyl-terminal hydrolase. - 206.875 4.70E-61 239 - 591 multi-dom 249862
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre06.g250750.t1.2 AT4G39910.1 Not available
KEGG description KEGG Pathway
Not available Not available
GO:0004197 GO:0004221 GO:0006511 -

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

ubiquitin thiolesterase activity

Details: 
Catalysis of the reaction: ubiquitin C-terminal thioester + H2O = ubiquitin + a thiol.
GO Category: 
MF

ubiquitin-dependent protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO Category: 
BP
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