36502 IF4E
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
36502 chr_10 IF4E 286367 286769 - IF4E
NCBI ID Ensembl Genomes exon ID
7447034 Thaps36502.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0399
Normalized Mean Residue
Thaps_bicluster_0175
0.42
hypothetical protein
0.9258
TIM_phosphate_binding superfamily
0.9193
GRX_PICOT_like
0.9155
FeThRed_B
0.913
0.9082
hypothetical protein
0.9053
hypothetical protein
0.9041
hypothetical protein
0.9038
COPIIcoated_ERV
0.8961
NAT_SF
0.8902
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
IF4E Eukaryotic initiation factor 4E; Eukaryotic initiation factor 4E. cl02106 180.102 2.76E-58 1 - 130 specific 250771
IF4E superfamily Eukaryotic initiation factor 4E; Eukaryotic initiation factor 4E. - 180.102 2.76E-58 1 - 130 superfamily 261179
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
6922 Not available 241388 292209 Not available Not available Not available Not available
KEGG description KEGG Pathway
RNA transport map03013
GO:0003723 GO:0003743 GO:0005737 GO:0006413 -

RNA binding

Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO Category: 
MF

translation initiation factor activity

Details: 
Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
GO Category: 
MF

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

translational initiation

Details: 
The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.
GO Category: 
BP
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