36971 PRK05704
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
36971 chr_12 PRK05704 751016 752153 - PRK05704
NCBI ID Ensembl Genomes exon ID
7447990 Thaps36971.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0366
Normalized Mean Residue
Thaps_bicluster_0109
0.50
(MDH1) PLN00106
0.8261
hypothetical protein
0.8009
(bd1709) NA
0.7977
(bd524) NA
0.7956
(bd1876) NatB_MDM20 superfamily
0.7955
(SCS2) PTZ00187
0.7808
HP_PGM_like
0.7746
Cullin_binding superfamily
0.7697
TRX_family
0.754
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
lipoyl_domain Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-... cl11404 87.0747 1.67E-21 1 - 70 specific 133458
Biotinyl_lipoyl_domains superfamily Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the... - 87.0747 1.67E-21 1 - 70 superfamily 264355
2-oxoacid_dh superfamily 2-oxoacid dehydrogenases acyltransferase (catalytic domain); These proteins contain one to three... - 255.939 1.24E-83 162 - 374 superfamily 249671
2-oxoacid_dh superfamily 2-oxoacid dehydrogenases acyltransferase (catalytic domain); These proteins contain one to three... - 255.939 1.24E-83 162 - 374 superfamily 249671
PRK05704 dihydrolipoamide succinyltransferase; Validated - 462.767 1.21E-161 1 - 378 multi-dom 235571
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_40430 PHATRDRAFT_40430 269253 326837 260532 Cre07.g343700.t1.2 AT4G26910.2 301304
KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110
GO:0003824 GO:0006633 GO:0008152 GO:0008415 GO:0004149 GO:0006099 GO:0045252 GO:0009354 -

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

fatty acid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
GO Category: 
BP

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA

dihydrolipoyllysine-residue succinyltransferase activity

Details: 
Catalysis of the reaction: succinyl-CoA + dihydrolipoamide = CoA + S-succinyldihydrolipoamide.
GO Category: 
MF

tricarboxylic acid cycle

Details: 
A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
GO Category: 
BP

oxoglutarate dehydrogenase complex

Details: 
A complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) ; EC:1.2.4.2 (E1), dihydrolipoamide S-succinyltransferase ; EC:2.3.1.61 (E2) and dihydrolipoamide dehydrogenase ; EC:1.8.1.4 (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2).
GO Category: 
CC

NA

Details: 
NA
GO Category: 
NA
Log in to post comments