37596 SpoT
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
37596 chr_15 SpoT 858542 861718 + SpoT
NCBI ID Ensembl Genomes exon ID
7450314 Thaps37596.1, Thaps37596.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0113
Normalized Mean Residue
Thaps_bicluster_0025
0.38
CobN_like
0.9505
(bd1449) SpoT
0.8971
LPLAT_MGAT-like
0.8925
hypothetical protein
0.8916
hypothetical protein
0.888
S2P-M50_like_2
0.8838
2A0111
0.8791
hypothetical protein
0.8774
p450 superfamily
0.8748
RIO superfamily
0.8739
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NT_Rel-Spo_like Nucleotidyltransferase (NT) domain of RelA- and SpoT-like ppGpp synthetases and hydrolases; This... cl11966 132.471 1.84E-35 530 - 630 specific 143389
Rel-Spo_like superfamily RelA- and SpoT-like ppGpp Synthetases and Hydrolases, catalytic domain; The Rel-Spo superfamily... - 132.471 1.84E-35 530 - 630 superfamily 264491
TGS_RelA_SpoT TGS_RelA_SpoT: The RelA (SpoT) protein, also referred to as ppGpp hydrolase/synthetase, is a... cl15768 99.5061 1.11E-24 688 - 747 specific 133438
TGS superfamily The TGS domain, named after the ThrRS, GTPase, and SpoT/RelA proteins where it occurs, is... - 99.5061 1.11E-24 688 - 747 superfamily 265779
ACT_4 ACT domain; ACT domains bind to amino acids and regulate associated enzyme domains. These ACT... cl09141 65.6342 8.69E-13 957 - 1030 specific 257632
ACT superfamily ACT domains are commonly involved in specifically binding an amino acid or other small ligand... - 65.6342 8.69E-13 957 - 1030 superfamily 263730
SpoT Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms /... - 752.16 0 288 - 1030 multi-dom 223394
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
25484 Not available 205946 195658 Not available Not available Not available 509187
KEGG description KEGG Pathway
Not available Not available
GO:0008152 GO:0016597 GO:0003824 GO:0015969 -

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

amino acid binding

Details: 
Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents.
GO Category: 
MF

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

guanosine tetraphosphate metabolic process

Details: 
The chemical reactions and pathways involving guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates.
GO Category: 
BP
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