38656 PRK05279
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38656 chr_22 PRK05279 653199 655591 - PRK05279

Synonyms

NCBI ID Ensembl Genomes exon ID
7443917 Thaps38656.3, Thaps38656.2, Thaps38656.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0149

Most Highly Correlated Transcripts

22549

hypothetical protein
0.8941

22138

Sec3_C superfamily
0.887

24334

EXS superfamily
0.8819

24492

Lipase_3
0.8799

10554

hypothetical protein
0.8776

25288

Sec6 superfamily
0.8763

25678

hypothetical protein
0.875

269183

2a30
0.8706

23450

hypothetical protein
0.8688

24530

hypothetical protein
0.867

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAK superfamily Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-... - 235.528 3.61E-71 321 - 607 superfamily 260430
PRK05279 N-acetylglutamate synthase; Validated - 378.724 1.78E-123 320 - 736 multi-dom 235386

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008080 GO:0004042 GO:0005737 GO:0006526 -

GO:0008080

N-acetyltransferase activity

Details: 
Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.
GO Category: 
MF

GO:0004042

acetyl-CoA:L-glutamate N-acetyltransferase activity

Details: 
Catalysis of the reaction: L-glutamate + acetyl-CoA = N-acetyl-L-glutamate + CoA + H(+).
GO Category: 
MF

GO:0005737

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

GO:0006526

arginine biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
GO Category: 
BP

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