40329 (RL18a) RPL20A
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
40329 chr_4 (RL18a) RPL20A 1201783 1202372 - RPL20A
NCBI ID Ensembl Genomes exon ID
7446093 Thaps40329.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0047
Normalized Mean Residue
Thaps_bicluster_0227
0.33
(RS16) PLN00210
0.9185
(RL28) Ribosomal_L28e
0.8844
(RL17) Ribosomal_L22
0.8803
(RL26) KOW_RPL26
0.8788
(RS24) PTZ00071
0.8728
(RS9) PLN00189
0.8707
(RL13e) Ribosomal_L13e superfamily
0.8599
(RS15A) PTZ00158
0.8477
(RS15B) PTZ00096
0.8462
(RL6) KOW_RPL6
0.841
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RPL20A Ribosomal protein L20A (L18A) [Translation, ribosomal structure and biogenesis] cl00945 78.1827 4.48E-19 73 - 153 specific 225068
Ribosomal_L18ae superfamily Ribosomal L18ae/LX protein domain; This family includes eukaryotic L18ae as well as archaebacterial... - 78.1827 4.48E-19 73 - 153 superfamily 260714
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
1913 PHATRDRAFT_36226 PHATRDRAFT_36226 273885 302544 420028 Cre01.g047750.t1.2 AT1G29965.1 354168
KEGG description KEGG Pathway
Ribosome map03010
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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