41291 (CAM1) PTZ00184
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
41291 chr_7 (CAM1) PTZ00184 547350 548743 + PTZ00184

Synonyms

NCBI ID Ensembl Genomes exon ID
7448985 Thaps41291.3, Thaps41291.2, Thaps41291.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0210

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0238
 0.33

Most Highly Correlated Transcripts

39299

(ARF3) Arf1_5_like
0.9492

36078

PRX5_like
0.9459

21249

hypothetical protein
0.9215

22673

NA
0.913

38924

PLN02627
0.9126

35055

(ASK1) APSK
0.9083

268343

NA
0.9041

39278

ATP-synt_C
0.902

33950

TMEM18
0.8986

36037

Trypsin_2
0.8985

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 76.8177 3.80E-19 12 - 74 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 76.8177 3.80E-19 12 - 74 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 76.8177 3.80E-19 12 - 74 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 76.8177 3.80E-19 12 - 74 superfamily 238008
PTZ00184 calmodulin; Provisional - 263.546 5.21E-91 1 - 149 multi-dom 185504

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_23794 PHATRDRAFT_23794 272437 239831 373343 Cre03.g178150.t1.1 AT3G43810.1 292780

KEGG

KEGG description KEGG Pathway
Phosphatidylinositol signaling system map04070

GO Terms

GO:0005509 -

GO:0005509

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

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