5077 PLN00015
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5077 chr_5 PLN00015 312198 313699 - PLN00015

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps5077.4, Thaps5077.2, Thaps5077.1, Thaps5077.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0024

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0102
 0.20

Most Highly Correlated Transcripts

5077

PLN00015
1

2465

hypothetical protein
0.9645

32201

Cob-chelat-sub
0.9548

575

PRK00062
0.9514

2036

hypothetical protein
0.9482

1989

FKBP_C
0.9477

8248

HopJ superfamily
0.9474

26548

MviM
0.9456

2356

hypothetical protein
0.9454

9021

(PbgD) hemC
0.9454

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN00015 protochlorophyllide reductase cl09931 564.331 0 93 - 389 specific 177654
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 564.331 0 93 - 389 superfamily 263925
FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [... - 68.3057 2.31E-13 88 - 346 multi-dom 223959

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12155 PHATRDRAFT_12155 267731 248228 63485 Cre01.g015350.t1.1 AT5G54190.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0016491 GO:0016630 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0016630

protochlorophyllide reductase activity

Details: 
Catalysis of the reaction: chlorophyllide a + NADP+ = protochlorophyllide + NADPH + H+.
GO Category: 
MF

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