517 (PSA1) proteasome_alpha_type_1
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
517 chr_6 (PSA1) proteasome_alpha_type_1 708902 710215 + proteasome_alpha_type_1
NCBI ID Ensembl Genomes exon ID
7448604 Thaps517.2, Thaps517.1, Thaps517.3
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0464
(bd899) FIG superfamily
0.9068
NAD_binding_8 superfamily
0.836
COG3899
0.8212
hypothetical protein
0.8131
hypothetical protein
0.8107
CK_II_beta
0.81
Solute_trans_a
0.8096
UBCc
0.8053
Sm_D3
0.8041
hypothetical protein
0.8038
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
proteasome_alpha_type_1 proteasome_alpha_type_1. The 20S proteasome, multisubunit proteolytic complex, is the central... cl00467 359.682 7.06E-126 6 - 216 specific 239718
Ntn_hydrolase superfamily The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are... - 359.682 7.06E-126 6 - 216 superfamily 260443
PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover,... - 195.979 2.53E-61 6 - 236 multi-dom 223711
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_27508 PHATRDRAFT_27508 206662 247793 118695 Cre06.g304300.t1.2 AT1G47250.1 541580
KEGG description KEGG Pathway
Proteasome map03050
GO:0004175 GO:0005839 GO:0006511 GO:0004298 GO:0004299 -

endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain.
GO Category: 
MF

proteasome core complex

Details: 
A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.
GO Category: 
CC

ubiquitin-dependent protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO Category: 
BP

threonine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA
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