5259 (RL44) PTZ00157
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
5259 chr_5 (RL44) PTZ00157 745218 745589 + PTZ00157
NCBI ID Ensembl Genomes exon ID
7446429 Thaps5259.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0046
Normalized Mean Residue
Thaps_bicluster_0205
0.26
(RL38) Ribosomal_L38e
0.9341
Ubiquitin
0.9221
(RS15A) PTZ00158
0.9033
(RS27) PLN00209
0.9013
(RL23a) PTZ00191
0.8993
(RL28) Ribosomal_L28e
0.8952
(RL26) KOW_RPL26
0.8943
(RS21) Ribosomal_S21e
0.8941
PTZ00106
0.8899
(RL22) Ribosomal_L22e
0.8868
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PTZ00157 60S ribosomal protein L36a; Provisional cl00706 116.453 1.57E-34 20 - 105 specific 240296
Ribosomal_L44 superfamily Ribosomal protein L44; Ribosomal protein L44. - 116.453 1.57E-34 20 - 105 superfamily 260582
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_8185 PHATRDRAFT_8185 204387 304708 Not available Cre06.g310700.t1.2 AT4G14320.1 289114
KEGG description KEGG Pathway
Ribosome map03010
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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