7120 ansAThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
7120	chr_7	ansA	1329869	1331102	+	ansA

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447116	Thaps7120.3, Thaps7120.1, Thaps7120.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0247

Most Highly Correlated Transcripts

bd874 (bd874) NA 0.9279	6642 hypothetical protein 0.9006	39741 (APM3) AP-3_Mu3_Cterm 0.8997	267979 HCO3_cotransp superfamily 0.8968	36425 MORN superfamily 0.8967	262287 hypothetical protein 0.8914
269660 hypothetical protein 0.8831	263010 KU superfamily 0.8798	9503 PTZ00121 0.8796	21223 hypothetical protein 0.8768

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
L-asparaginase_I		Type I (cytosolic) bacterial L-asparaginase; Asparaginases (amidohydrolases, E.C. 3.5.1.1) are...	cl00216	312.206	2.34E-104	13 - 317	specific	199207
L-asparaginase_like superfamily		Bacterial L-asparaginases and related enzymes; Asparaginases (amidohydrolases, E.C. 3.5.1.1) are...	-	312.206	2.34E-104	13 - 317	superfamily	260269
ansA		cytoplasmic asparaginase I; Provisional	-	357.359	1.07E-121	13 - 330	multi-dom	181876

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_20905	PHATRDRAFT_20905	187917	302829	441969	Cre13.g576150.t1.1	Not available	253447

KEGG

KEGG description	KEGG Pathway
Biosynthesis of secondary metabolites	map01110

GO Terms

GO:0004067 GO:0006520 -

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