8926 MDR8
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8926 chr_12 MDR8 33075 35351 - MDR8

Synonyms

NCBI ID Ensembl Genomes exon ID
7449354 Thaps8926.2, Thaps8926.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0092

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0206
 0.21

Most Highly Correlated Transcripts

bd765

(bd765) NA
0.9772

bd1081

(bd1081) NA
0.9649

7484

hypothetical protein
0.9645

4300

SCP superfamily
0.9527

25464

hypothetical protein
0.9526

bd1173

(bd1173) S_TKc
0.9483

6004

hypothetical protein
0.9476

4596

hypothetical protein
0.9467

23875

hypothetical protein
0.9412

bd1852

(bd1852) NA
0.9402

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family; This... cl16912 402.797 2.26E-134 380 - 724 specific 176234
MDR superfamily Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; The... - 402.797 2.26E-134 380 - 724 superfamily 266485
Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion... - 148.265 1.57E-39 381 - 722 multi-dom 223677

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 233829 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003779 GO:0008270 GO:0016491 GO:0008152 GO:0051341 -

GO:0003779

actin binding

Details: 
Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0051341

regulation of oxidoreductase activity

Details: 
Any process that modulates the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
BP

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