9756 Ribosomal_L21p superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
9756 chr_14 Ribosomal_L21p superfamily 280307 281296 + Ribosomal_L21p superfamily
NCBI ID Ensembl Genomes exon ID
7451207 Thaps9756.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0011
Normalized Mean Residue
Thaps_bicluster_0006
0.41
hypothetical protein
0.8771
0.859
hypothetical protein
0.8545
PLN03227
0.8381
TIM_phosphate_binding superfamily
0.8324
rplO
0.8302
hypothetical protein
0.8294
hypothetical protein
0.8269
0.8228
GRX_PICOT_like
0.8207
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L21p superfamily Ribosomal prokaryotic L21 protein; Ribosomal prokaryotic L21 protein. - 63.9683 5.06E-13 203 - 309 superfamily 241828
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_33523 PHATR_33523 193953 234654 Not available Cre09.g388550.t1.2 Not available 344419
KEGG description KEGG Pathway
Not available Not available
GO:0003723 GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

RNA binding

Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO Category: 
MF

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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