9998 BTB superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
9998 chr_14 BTB superfamily 947389 947964 + BTB superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451597 Thaps9998.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0303

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0004
 0.42

Most Highly Correlated Transcripts

10989

hypothetical protein
0.792

bd453

(bd453) Mito_carr
0.6824

23350

lectin_L-type
0.6655

4630

hypothetical protein
0.6601

6875

DUF4471 superfamily
0.6515

264152

0.648

3321

SMC_prok_B
0.6441

6637

hypothetical protein
0.6431

263792

(ubi6r)
0.64

11743

hypothetical protein
0.6356

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
BTB superfamily BTB/POZ domain; The BTB (for BR-C, ttk and bab) or POZ (for Pox virus and Zinc finger) domain is... - 67.589 3.02E-15 9 - 91 superfamily 261320

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 252732 222270 Not available Not available AT4G30940.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 GO:0005249 GO:0006813 GO:0008076 GO:0016020 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0005249

voltage-gated potassium channel activity

Details: 
Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
GO Category: 
MF

GO:0006813

potassium ion transport

Details: 
The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0008076

voltage-gated potassium channel complex

Details: 
A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential.
GO Category: 
CC

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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