PHATRDRAFT_11710 separation anxiety (RimI)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_11710	chr_6	separation anxiety (RimI)	504095	504523	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0482

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0243	0.22	31000 10000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NAT_SF		N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an...	cl17182	41.4925	1.95E-06	42 - 93	specific	173926
NAT_SF superfamily		N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an...	-	41.4925	1.95E-06	42 - 93	superfamily	266534
RimI		Acetyltransferases [General function prediction only]	-	66.9438	1.13E-14	36 - 128	multi-dom	223532

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
36884		Not available	233930	193696	455437	Cre02.g101850.t1.2	AT5G11340.1	510427

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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