PHATRDRAFT_11994 dna-binding response regulator (CitB)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_11994 chr_7 dna-binding response regulator (CitB) 488481 489185 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0047

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
REC Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... cl19078 118.832 7.39E-34 3 - 125 specific 238088
REC superfamily Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... - 118.832 7.39E-34 3 - 125 superfamily 267431
LuxR_C_like C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif... cl17315 63.3224 6.49E-14 160 - 216 specific 99777
LuxR_C_like superfamily C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif... - 63.3224 6.49E-14 160 - 216 superfamily 266624
CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal... - 135.509 4.20E-39 1 - 222 multi-dom 225107

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
33288 Not available 210668 301296 69109 Cre05.g243000.t1.1 AT2G01760.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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