PHATRDRAFT_12972 isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase (IPP_Isomerase)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_12972	chr_10	isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase (IPP_Isomerase)	89343	90249	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0227

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0103	0.38	3.8 5600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
IPP_Isomerase		Isopentenyl diphosphate (IPP) isomerase, a member of the Nudix hydrolase superfamily, is a key...	cl00447	212.424	3.47E-69	28 - 226	specific	239218
Nudix_Hydrolase superfamily		Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes...	-	212.424	3.47E-69	28 - 226	superfamily	260427
Idi		Isopentenyldiphosphate isomerase [Lipid metabolism]	-	179.88	4.25E-56	22 - 242	multi-dom	224360

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
31266		Not available	142070	156063	Not available	Cre11.g467544.t1.1	AT5G16440.1	514370

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments