PHATRDRAFT_15042 topoisomerase 6 subunit b (top6b)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_15042 chr_17 topoisomerase 6 subunit b (top6b) 323869 325509 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0050

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0208
 0.30

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TopoIIB_Trans TopoIIB_Trans: Transducer domain, having a ribosomal S5 domain 2-like fold, of the type found in... cl02783 172.856 7.12E-51 375 - 525 specific 238420
TopoII_MutL_Trans superfamily MutL_Trans: transducer domain, having a ribosomal S5 domain 2-like fold, conserved in the C-... - 172.856 7.12E-51 375 - 525 superfamily 261445
HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:... cl00075 34.9298 0.00777718 112 - 158 specific 238030
HATPase_c superfamily Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:... - 34.9298 0.00777718 112 - 158 superfamily 260175
top6b DNA topoisomerase VI, B subunit; This model describes DNA topoisomerase VI, an archaeal type II DNA... - 317.53 1.95E-101 3 - 544 multi-dom 233250

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
40335 Not available 208537 179763 465510 Cre01.g019750.t1.1 AT3G20780.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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