PHATRDRAFT_15374 seryl-trna synthetase (PRK05431)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_15374 chr_19 seryl-trna synthetase (PRK05431) 307507 308835 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0134

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0022
 0.39

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SerRS_core Seryl-tRNA synthetase (SerRS) class II core catalytic domain. SerRS is responsible for the... cl00268 446.236 8.51E-156 113 - 431 specific 238393
class_II_aaRS-like_core superfamily Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA... - 446.236 8.51E-156 113 - 431 superfamily 260313
Seryl_tRNA_N superfamily Seryl-tRNA synthetase N-terminal domain; This domain is found associated with the Pfam tRNA... - 56.8376 3.42E-10 14 - 100 superfamily 251274
PRK05431 seryl-tRNA synthetase; Provisional - 613.614 0 14 - 440 multi-dom 235461

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
39606 Not available 182285 202716 73074 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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