PHATRDRAFT_15820 tpa_inf: chloroplast light-harvesting complex protein precursor lhcz1 (Chloroa_b-bind)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_15820	chr_21	tpa_inf: chloroplast light-harvesting complex protein precursor lhcz1 (Chloroa_b-bind)	646987	647397	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0180

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0043	0.34	0.000000024 16000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Chloroa_b-bind		Chlorophyll A-B binding protein; Chlorophyll A-B binding protein.	cl02879	71.9542	8.88E-17	1 - 125	specific	249913
Chloroa_b-bind superfamily		Chlorophyll A-B binding protein; Chlorophyll A-B binding protein.	-	71.9542	8.88E-17	1 - 125	superfamily	261492

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
4871		Not available	143504	165271	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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