PHATRDRAFT_16281 mgc83338 protein (RRM_eIF3G_like)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_16281 chr_24 mgc83338 protein (RRM_eIF3G_like) 141823 142074 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0140

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0230
 0.25

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RRM_eIF3G_like RNA recognition motif in eukaryotic translation initiation factor 3 subunit G (eIF-3G) and similar... cl17169 130.352 1.03E-40 7 - 83 specific 240854
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 130.352 1.03E-40 7 - 83 superfamily 266524
COG0724 RNA-binding proteins (RRM domain) [General function prediction only] - 72.287 5.69E-17 1 - 84 multi-dom 223796

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
32790 Not available 172705 116927 443688 Cre06.g269450.t1.2 AT3G11400.1 559962

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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