PHATRDRAFT_17166 ac073942_7a pr00989 protein from homo sapiens gi (COPIIcoated_ERV)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_17166	chr_1	ac073942_7a pr00989 protein from homo sapiens gi (COPIIcoated_ERV)	99619	101121	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0090

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0031	0.36	0.0019 46000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COPIIcoated_ERV superfamily		Endoplasmic reticulum vesicle transporter; This family is conserved from plants and fungi to humans...	-	214.856	4.62E-66	220 - 485	superfamily	254553
COPIIcoated_ERV superfamily		Endoplasmic reticulum vesicle transporter; This family is conserved from plants and fungi to humans...	-	214.856	4.62E-66	220 - 485	superfamily	254553
ERGIC_N superfamily		Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); This family is the N-terminal of...	-	129.919	2.86E-36	75 - 173	superfamily	258122
ERGIC_N superfamily		Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); This family is the N-terminal of...	-	129.919	2.86E-36	75 - 173	superfamily	258122

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
42687		Not available	277413	152914	430522	Not available	Not available	328225

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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